LOCUS OSU12T
355 bp DNA
12-AUG-1996
DEFINITION Astatoreochromis alluaudi.
ACCESSION U66809
KEYWORDS STS .
SOURCE Lake Victoria african cichlid
adult DNA.
ORGANISM Astatoreochromis alluaudi
Animalia; Chordata; Vertebrata; Actinopterygii; Neopterygii;
Osteichthyes; Euteleostei; Acanthopterygii; Percomorpha;
Perciformes; Percoidei; Percoidea; Cichlidae.
REFERENCE 1 (bases 1-355)
AUTHORS Wu, L., Booton, G. C., Kaufman, L., Chandler,
M., and Fuerst, P. A.
TITLE Use of DNA microsatellite loci
to identify populations and species
of Lake Victoria haplochromine cichlids.
JOURNAL Aquaculture Biotechnology Symposium Proceedings,
International
Congress on the Biology of Fishes, Physiology Section, American
Fisheries Society 1 (1), 105-113 (1996)
STANDARD full automatic
COMMENT
These data kindly submitted in computer readable form by:
PAUL A FUERST
MOLECULAR GENETICS
THE OHIO STATE UNIVERSITY
484 W. 12TH AVENUE
COLUMBUS, OHIO 43210-1292
USA
Phone: 614-292-6403
Email: pfuerst@magnus.acs.ohio-state.edu
Fax: 614-292-4466
FEATURES
LOCATION/QUALIFIERS
misc_feature 50..156
/*tag= a
/label= STS
/note= "STS SIZE: 107"
/citation= ([1])
satellite
71..109
/*tag= b
/rpt_type= tandem
/rpt_family= "NGC"
/standard_name= "TRINUCLEOTIDE MICROSATELLITE"
/note= "1 ALLELE (TOTAL) OBSERVED IN THREE POPULATIONS.
UP TO FOUR ALLELES (SIZES RANGE FROM 107 - 125 BP)
OBSERVED IN RELATED HAPLOCHROMINE CICHLIDS."
primer_bind 50..69
/*tag= c
/standard_name= "UPSTREAM PRIMER"
/label= PRIMER-U
/note= "PRIMER U SEQUENCE: TCAAACACCCACAGCCTTCA"
primer_bind complement
(135..156)
/*tag= d
/standard_name= "DOWNSTREAM PRIMER"
/label= PRIMER-D
/note= "PRIMER D SEQUENCE: CGGTGATTGCTGTTGATACTGA"
BASE COUNT 117 a 113
c 72 g 43 t
10 others
ORIGIN
1 gatcacgagg ataatgaaac
agagacccgg aatgaagagg tctcaataat caaacaccca
61 cagccttcaa agcagcagca gcagccgcag
cagcagctgc agccgcagcc acacactaag
121 tctcagtcac agcctcagta tcaacagcan
tcacngntgn tgctgcacag cancannaac
181 aactgcaaca tcagcagcca cctnagcagc
agcaacagca gcaacaacag cagcaacagc
241 ctactgaccc agcttccccc actgtggcna
ctaccccaga gcctgtcacc atcgaaggag
301 aagacaagac atcccccaag acnccagaca
ctgagtctga gtatgaggta agatc