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Manuscripts:
[PDF] Glen McGillivary, William C. Ray, Charles L. Bevins, Robert S. Munson Jr., and Lauren O. Bakaletz. “A member of the cathelicidin family of antimicrobial peptides is produced in the upper airway of the chinchilla and its mRNA expression is altered by common viral and bacterial co-pathogens of otitis media”, Molecular Immunology, vol 44, pp 2446-2458, 2007. [PDF] Hatice Gulcin Ozer and William C. Ray. “MAVL/StickWRLD: Analyzing Structural Constraints using Interpositional Dependencies in Biomolecular Sequence Alignments”, Nucleic Acids Research, vol 34, Web Server Issue, pp W133-W136, 2006. [PDF] Alistair Harrison, David W. Dyer, Allison Gillaspy, William C. Ray, Rachna Mungur, Matt Carson, Huachun Zhong, Jenny Gipson, Mandy Gipson, Linda S. Johnson, Lisa Lewis and Robert S. Munson Jr. “Genomic Sequence of an Otitis Media Isolate of Nontypeable Haemophilus influenzae : Comparative Study with H. influenzae Serotype D. Strain KW20”, Journal of Bacteriology, vol 187, no. 13, pp 4627-4636, 2005. [PDF] William C. Ray. “MAVL/StickWRLD: Visualizing Protein Sequence Families to Detect Non-Consensus Features”, Nucleic Acids Research, vol 33, Web Server Issue, pp W315-W319, 2005. [LINK] Robert S. Munson Jr., Alistair Harrison, David W. Dyer, Allison Gillaspy, William C. Ray, Rachna Mungur, Matt Carson, Huachun Zhong, Jenny Gipson, Mandy Gipson, Linda S. Johnson, Lisa Lewis, and Lauren O. Bakaletz. “Haemophilus influenzae strain 86-028NP”. GenBank Accession no. NC 007146, 2005. [PDF] William C. Ray. “MAVL/StickWRLD: Visually Exploring Relationships in Nucleic-Acid Sequence Alignments”, Nucleic Acids Research, vol 32, Web Server Issue, pp W59-W63, 2004. [PDF] William C. Ray and Robert S. Munson Jr. “Microbial-pathogenesis.org, an Experimental System for Simultaneous Genomics Research and Data Sharing: Preliminary Report”, WSEAS Transactions on Computers, vol 3, no. 5, pp 1264-1267, November 2004. [PDF] Selnur Erdal, Ozgur Ozturk, Dave Armbruster, Hakan Ferhatosmanoglu, and William C. Ray. “A Novel Approach to Time Series Analysis of Microarray Data”, Transactions of the IEEE Fourth International Symposium on Bioinformatics and Bioengineering (BIBE2004), pp 366-378, May 2004. [PDF] Robert S. Munson Jr., Alistair Harrison, Allison Gillaspy, William C. Ray, Matt Carson, David Armbruster, Jenny Gipson, Mandy Gipson, Linda Johnson, Lisa Lewis, David W. Dyer and Lauren O. Bakaletz. “Partial Analysis of the Genomes of Two Nontypeable Haemophilus influenzae Otitis Media Isolates”, Infection and Immunity, vol 72, no. 5, pp 3002-3010, 2004. [PDF] Robert S. Munson Jr., Huachun Zhong, Rachna Mungur, William C. Ray, Robin J. Shea, Gregory G. Mahairas and Martha H. Mulks. “Haemophilus ducreyi strain ATCC 27722 contains a genetic element with homology to the Vibrio RS1 element that can replicate as a plasmid and confer NAD independence to Haemophilus influenzae ”, Infection and Immunity, vol 72, no. 2, pp 1143-1146, 2004. [LINK] R. S. Munson Jr., W. C. Ray, G. Mahairas, P. Sabo, R. Mungur, L. Johnson, D. Nguyen, J. Wang, C. Forst, and L. Hood. “Haemophilus ducreyi strain 35000HP”. GenBank Accession no. NC 002940, 2003. [PDF] William C. Ray and Charles J. Daniels, “PACRAT: a database and analysis system for archaeal and bacterial intergenic sequence features”, Nucleic Acids Research, vol 31, no. 1, pp 109-113, 2003. [PDF] William C. Ray, Robert S. Munson, and Charles J. Daniels, “Tricross: Using dot-plots in sequence-id space to detect uncataloged intergenic features”, Bioinformatics, vol 17, no. 12, pp 1105-1112, 2001. [PDF] William C. Ray and Charles J. Daniels, “The PACRAT system: an extensible WWW-based system for correlated sequence retrieval, storage and analysis”, Bioinformatics, vol 17, no. 1, pp 100-104, 2001. [PDF]Roni Yagel and William C. Ray, “Visibility Computation for Efficient Walkthrough of Complex Environments”, Presence : Special Issue on Virtual Environments, vol 5, no. 1. pp 45-60. MIT Press, 1996. [PDF] Stuart Weibel, Mark Bendig and Will Ray, “The CORE Project: Formatting Chemistry Information for Screen Display in HyperCard”, Macintoshed Libraries, vol 5, pp 78-84. Apple Library Users’ Group, 1992. |